check results — check_results • MotrpacBicQC

check whether results file is following guidelines

check_results(r_m, m_s, m_m, return_n_issues = FALSE, verbose = TRUE)

Arguments

r_m: (data.frame) results df
m_s: (char) metadata_sample df
m_m: (char) metadata_metabolites df
return_n_issues: (logical) if TRUE returns the number of issues
verbose: (logical) TRUE (default) shows messages

Value

(int) number of issues identified

Examples

{
check_results(r_m = results_named, m_s = metadata_sample_named, m_m = metadata_metabolites_named)
}
#>   + (+) All samples from `results_metabolite` are available in `metadata_sample`
#>   + (+) `metabolite_name` is identical in both [results] and `metadata_metabolites` files: OK
#>   + (+) `sample_id` columns are numeric: OK