Merge all metabolomics files

Source: R/metabolomics_qc.R

Merge all metabolomics datasets, including "results" and "metadata" files, for both targeted and untargeted datasets

merge_all_metabolomics(m_m_n, m_m_u = NULL, m_s_n, r_m_n, r_m_u = NULL, phase)

Arguments

m_m_n

(metabolomics metadata named)

m_m_u

(metabolomics metadata unnamed)

m_s_n

(metabolomics sample named)

r_m_n

(results named)

r_m_u

(results unnamed)

phase

(MoTrPAC Animal phase. Eg. PASS1A-06)

Value

(data.frame) Merged data frame long format

Examples

plasma.untargeted.merged <- merge_all_metabolomics(
       m_m_n = metadata_metabolites_named,
       m_m_u = metadata_metabolites_unnamed,
       m_s_n = metadata_sample_named,
       r_m_n = results_named,
       r_m_u = results_unnamed,
       phase = "PASS1A-06")