Write olink data release

Source: R/olink_qc.R

Write out olink data releases. Doesn't check whether data has been submited according to guidelines

write_olink_releases(
  input_results_folder,
  folder_name = "motrpac_release",
  folder_root = NULL,
  version_file = "v1.0",
  verbose = TRUE
)

Arguments

input_results_folder

(char) Path to the RESULTS_YYYYMMDD folder

folder_name

(char) output folder name.

folder_root

(char) absolute path to write the output folder. Default: current directory

version_file

(char) file version number (v#.#)

verbose

(logical) TRUE (default) shows messages

Value

bic release folder/file structure PHASE/OMICS/TCODE_NAME/ASSAY/ and file names, including:

  • motrpac_phase-code_tissuecode_assay_file-details-version.txt where files-details can be:

  • metadata-proteins,

  • metadata-samples,

  • results

Examples

if (FALSE) { # \dontrun{
write_olink_releases(
   input_results_folder = "/full/path/to/RESULTS_YYYYMMDD/")
} # }