Plot module ORA results — plot_ORA • MotrpacRatTraining6moWAT

Dotplot of the top over-represented terms by WGCNA module.

Usage

plot_ORA(
  x,
  n_terms = 5L,
  mods = 1:5,
  subset = "GO:MF",
  rel_heights = c(0.8, 0.2)
)

x: output of fora or fora2.
n_terms: integer; maximum number of top over-represented terms to display from each module.
mods: integer; the module numbers to include in the plot. By default, terms from modules 1-5 (the 5 largest modules) are shown.
subset: character; the gene set subcategory of terms to plot. Default is "GO:MF".
rel_heights: numeric; vector of length 2 specifying the relative heights of the plot and color legend, respectively. Default is c(0.8, 0.2).

A ggplot object.