Load ATAC or METHYL timewise differential analysis results for a tissue from
Google Cloud Storage. See ATAC_DA and METHYL_DA
for more details.
Usage
load_epigen_da(tissue, assay, scratchdir = ".")
Arguments
- tissue
character, tissue abbreviation, one of "BAT", "HEART", "HIPPOC", "KIDNEY", "LIVER", "LUNG", "SKM-GN", "WAT-SC"
- assay
character, one of "METHYL" (RRBS) or "ATAC"
- scratchdir
character, local directory in which to download data from
Google Cloud Storage. Current working directory by default.
Value
data frame. See ATAC_DA and METHYL_DA for details.
Examples
if (FALSE) { # \dontrun{
# Return ATAC-seq differential analysis results for gastrocnemius skeletal muscle
data = load_epigen_da("SKM-GN", "METHYL")
} # }