Weighted Gene Co-expression Network Analysis (WGCNA) applied to subcutaneous white adipose tissue proteomics, transcriptomics, and metabolomics datasets to derive clusters of similarly-behaving features for further examination.
PROT_WGCNA # proteomics
TRNSCRPT_WGCNA # transcriptomics
METAB_WGCNA # metabolomics
See run_WGCNA
for a
description of the output.
Horvath, S. (2011). Weighted Network Analysis. Springer New York. https://doi.org/10.1007/978-1-4419-8819-5
Langfelder, P., & Horvath, S. (2008). WGCNA: an R package for weighted correlation network analysis. BMC Bioinformatics, 9(1), 1–13. https://doi.org/10.1186/1471-2105-9-559